| Name: | Vdr |
| Matrix ID: | MA0693.1 |
| Class: | Nuclear receptors with C4 zinc fingers |
| Family: | Thyroid hormone receptor-related factors (NR1) |
| Collection: | CORE |
| Taxon: | Vertebrates |
| Species: | Mus musculus |
| Data Type: | HT-SELEX |
| Validation: | 8065900 |
| Uniprot ID: | P48281 |
| Source: | 23332764 |
| Comment: | Data is from Taipale HTSELEX DBD (2013) |
| A [ | 149 | 1671 | 28965 | 29193 | 5 | 3 | 464 | 13845 | 19613 | 210 | 884 | 30107 | 29506 | 11 | 1 | 173 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 4040 | 73 | 1241 | 2512 | 28372 | 12607 | 22959 | 2619 | 1638 | 3649 | 62 | 919 | 3866 | 28323 | 12584 | 23911 | ] |
| G [ | 137 | 45781 | 391 | 7 | 2 | 14 | 2186 | 12672 | 8775 | 130 | 46948 | 455 | 13 | 5 | 11 | 1471 | ] |
| T [ | 37729 | 7 | 263 | 2 | 6 | 20690 | 5903 | 6013 | 3643 | 35680 | 43 | 267 | 5 | 8 | 20648 | 5712 | ] |
Binding sites information
No Binding sites available for this model.
External links
| Matrix ID | Base ID | Version | Name | Species | Family | Class | Sequence logo |
|---|---|---|---|---|---|---|---|
| MA0693.1 | MA0693 | 1 | Vdr |
Mus musculus
|
Thyroid hormone receptor-related factors (NR1) | Nuclear receptors with C4 zinc fingers |  |
| MA0693.2 | MA0693 | 2 | VDR |
Homo sapiens
|
Thyroid hormone receptor-related factors (NR1) | Nuclear receptors with C4 zinc fingers |  |
| MA0693.3 | MA0693 | 3 | Vdr |
Mus musculus
|
Thyroid hormone receptor-related factors (NR1) | Nuclear receptors with C4 zinc fingers |  |
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.
Description:
Alias:
Symbol:
Consensus:
Included Models:
GC Content: