Detailed information of matrix profile MA1147.1

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Profile summary
Name: NR4A2::RXRA
Matrix ID: MA1147.1
Class: Nuclear receptors with C4 zinc fingers::Nuclear receptors with C4 zinc fingers
Family: NGFI-B-related receptors (NR4)::RXR-related receptors (NR2)
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: SMiLE-seq
Validation: 7705655
Uniprot ID: P19793   P43354  
Source: 28092692
Comment:

Sequence logo

Frequency matrix

         
A [ 244 437 20 11 3 12 924 604 27 138 691 139 46 29 130 ]
C [ 180 23 4 2 17 836 5 87 343 31 128 804 924 348 371 ]
G [ 473 535 937 830 54 82 69 60 38 824 134 7 11 124 212 ]
T [ 104 5 40 157 926 70 2 248 592 7 46 51 20 498 288 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1147.1 MA1147 1 NR4A2::RXRA Homo sapiens
NGFI-B-related receptors (NR4)::RXR-related receptors (NR2) Nuclear receptors with C4 zinc fingers::Nuclear receptors with C4 zinc fingers
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: