Detailed information of matrix profile UN0455.1

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Profile summary

Name: Meis
Matrix ID: UN0455.1
Class: Homeo domain factors
Family: TALE-type homeo domain factors
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID: Q4H374  
Source: 31267468
Comment:

Sequence logo

Frequency matrix

         
A [ 242 245 247 269 273 365 206 115 29 25 118 10 880 283 248 221 226 227 234 248 ]
C [ 234 224 240 273 260 189 305 662 47 10 50 962 34 230 255 265 247 237 252 268 ]
G [ 263 274 271 234 232 257 288 115 11 949 25 16 39 238 245 213 235 252 249 233 ]
T [ 260 257 242 223 234 189 201 107 912 16 808 13 46 249 253 300 291 283 265 250 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0455.1 UN0455 1 Meis Ciona intestinalis
TALE-type homeo domain factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: