Detailed information of matrix profile UN0464.1

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Profile summary

Name: Pax6
Matrix ID: UN0464.1
Class: Paired box factors
Family: Paired plus homeo domain
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID: Q4H2Y8  
Source: 31267468
Comment:

Sequence logo

Frequency matrix

         
A [ 281 282 282 315 267 156 185 811 896 24 20 884 741 179 164 315 318 307 248 298 ]
C [ 235 211 223 213 277 321 271 88 29 30 57 26 82 255 279 231 220 202 254 236 ]
G [ 198 182 209 291 220 208 158 66 27 23 51 57 108 191 221 216 239 235 184 174 ]
T [ 286 325 286 181 235 315 387 35 48 923 873 33 70 375 335 238 222 257 314 292 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0464.1 UN0464 1 Pax6 Ciona intestinalis
Paired plus homeo domain Paired box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: